IL_6WNW_145
3D structure
- PDB id
- 6WNW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAAAUUCCUUG*CCUG
- Length
- 16 nucleotides
- Bulged bases
- 6WNW|1|4|A|2066, 6WNW|1|4|U|2072
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WNW_145 not in the Motif Atlas
- Geometric match to IL_7A0S_072
- Geometric discrepancy: 0.1407
- The information below is about IL_7A0S_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04332.3
- Basepair signature
- cWW-L-R-L-cWW-L-L-R-L-R-L
- Number of instances in this motif group
- 2
Unit IDs
6WNW|1|4|C|2062
6WNW|1|4|G|2063
6WNW|1|4|A|2064
6WNW|1|4|A|2065
6WNW|1|4|A|2066
6WNW|1|4|U|2067
6WNW|1|4|U|2068
6WNW|1|4|C|2069
6WNW|1|4|C|2070
6WNW|1|4|U|2071
6WNW|1|4|U|2072
6WNW|1|4|G|2073
*
6WNW|1|4|C|2089
6WNW|1|4|C|2090
6WNW|1|4|U|2091
6WNW|1|4|G|2092
Current chains
- Chain 4
- 23s-5s joint ribosomal RNA
Nearby chains
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain 7
- Transfer RNA; tRNA
- Chain b
- 50S ribosomal protein L2
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