IL_6WNW_161
3D structure
- PDB id
- 6WNW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CCAAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WNW_161 not in the Motif Atlas
- Geometric match to IL_5J7L_338
- Geometric discrepancy: 0.105
- The information below is about IL_5J7L_338
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
6WNW|1|4|C|2594
6WNW|1|4|C|2595
6WNW|1|4|A|2596
6WNW|1|4|A|2597
6WNW|1|4|G|2598
*
6WNW|1|4|C|2608
6WNW|1|4|G|2609
6WNW|1|4|A|2610
6WNW|1|4|C|2611
6WNW|1|4|G|2612
Current chains
- Chain 4
- 23s-5s joint ribosomal RNA
Nearby chains
- Chain 7
- Transfer RNA; tRNA
- Chain F
- 50S ribosomal protein L36
- Chain m
- 50S ribosomal protein L16
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