IL_6WQN_042
3D structure
- PDB id
- 6WQN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUGAGUAG*UGAAAUC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WQN_042 not in the Motif Atlas
- Homologous match to IL_4WF9_048
- Geometric discrepancy: 0.0843
- The information below is about IL_4WF9_048
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.3
- Basepair signature
- cWW-cWW-tSH-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
6WQN|1|1|G|1300
6WQN|1|1|U|1301
6WQN|1|1|G|1302
6WQN|1|1|A|1303
6WQN|1|1|G|1304
6WQN|1|1|U|1305
6WQN|1|1|A|1306
6WQN|1|1|G|1307
*
6WQN|1|1|U|2038
6WQN|1|1|G|2039
6WQN|1|1|A|2040
6WQN|1|1|A|2041
6WQN|1|1|A|2042
6WQN|1|1|U|2043
6WQN|1|1|C|2044
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain E
- 50S ribosomal protein L22
- Chain N
- 50S ribosomal protein L32
- Chain S
- 50S ribosomal protein L4
Coloring options: