IL_6WQN_046

3D structure

PDB id

6WQN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUAAUCGUAU*AUAGAAAAU

Length

19 nucleotides

Bulged bases

6WQN|1|1|C|1452, 6WQN|1|1|U|1454, 6WQN|1|1|U|1629, 6WQN|1|1|A|1632, 6WQN|1|1|A|1633

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WQN|1|1|A|1447
6WQN|1|1|U|1448
6WQN|1|1|A|1449
6WQN|1|1|A|1450
6WQN|1|1|U|1451
6WQN|1|1|C|1452
6WQN|1|1|G|1453
6WQN|1|1|U|1454
6WQN|1|1|A|1459
6WQN|1|1|U|1460
*
6WQN|1|1|A|1628
6WQN|1|1|U|1629
6WQN|1|1|A|1630
6WQN|1|1|G|1631
6WQN|1|1|A|1632
6WQN|1|1|A|1633
6WQN|1|1|A|1634
6WQN|1|1|A|1635
6WQN|1|1|U|1636

Current chains

Chain 1

23S rRNA

Nearby chains