IL_6WQN_056

3D structure

PDB id

6WQN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUUAGGG*CCCAGAA

Length

14 nucleotides

Bulged bases

6WQN|1|1|A|1758

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6WQN_056 not in the Motif Atlas

Homologous match to IL_4WF9_118

Geometric discrepancy: 0.584

The information below is about IL_4WF9_118

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WQN|1|1|U|1755
6WQN|1|1|U|1756
6WQN|1|1|U|1757
6WQN|1|1|A|1758
6WQN|1|1|G|1759
6WQN|1|1|G|1760
6WQN|1|1|G|1761
*
6WQN|1|1|C|1768
6WQN|1|1|C|1769
6WQN|1|1|C|1770
6WQN|1|1|A|1771
6WQN|1|1|G|1772
6WQN|1|1|A|1773
6WQN|1|1|A|1774

Current chains

Chain 1

23S rRNA

Nearby chains