IL_6WQN_073

3D structure

PDB id

6WQN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAGAAU*AUUCAUAG

Length

14 nucleotides

Bulged bases

6WQN|1|1|A|2328

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WQN|1|1|C|2324
6WQN|1|1|A|2325
6WQN|1|1|G|2326
6WQN|1|1|A|2327
6WQN|1|1|A|2328
6WQN|1|1|U|2329
*
6WQN|1|1|A|2341
6WQN|1|1|U|2342
6WQN|1|1|U|2343
6WQN|1|1|C|2344
6WQN|1|1|A|2345
6WQN|1|1|U|2346
6WQN|1|1|A|2347
6WQN|1|1|G|2348

Current chains

Chain 1

23S rRNA

Nearby chains

Chain 2

5S ribosomal RNA; 5S rRNA

Chain a

50S ribosomal protein L18