IL_6WRS_020

3D structure

PDB id

6WRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6WRS_020 not in the Motif Atlas

Homologous match to IL_4WF9_024

Geometric discrepancy: 0.1228

The information below is about IL_4WF9_024

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_50730.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

19

Unit IDs

6WRS|1|1|U|748
6WRS|1|1|G|749
6WRS|1|1|A|750
6WRS|1|1|A|751
6WRS|1|1|G|752
*
6WRS|1|1|U|769
6WRS|1|1|G|770
6WRS|1|1|G|771
6WRS|1|1|A|772
6WRS|1|1|G|773

Current chains

Chain 1

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L2