3D structure

PDB id
6WRS (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolid
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
AU*AUU
Length
5 nucleotides
Bulged bases
6WRS|1|1|U|970
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6WRS_026 not in the Motif Atlas
Geometric match to IL_4V9F_013
Geometric discrepancy: 0.3567
The information below is about IL_4V9F_013
Detailed Annotation
Single bulged U
Broad Annotation
No text annotation
Motif group
IL_89505.4
Basepair signature
cWW-L-cWW
Number of instances in this motif group
117

Unit IDs

6WRS|1|1|A|897
6WRS|1|1|U|898
*
6WRS|1|1|A|969
6WRS|1|1|U|970
6WRS|1|1|U|971

Current chains

Chain 1
23S rRNA

Nearby chains

Chain I
50S ribosomal protein L27
Chain M
50S ribosomal protein L30

Coloring options:


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