IL_6WRS_039

3D structure

PDB id

6WRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGG*CGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6WRS_039 not in the Motif Atlas

Homologous match to IL_4WF9_045

Geometric discrepancy: 0.1369

The information below is about IL_4WF9_045

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10167.6

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

51

Unit IDs

6WRS|1|1|G|1243
6WRS|1|1|G|1244
6WRS|1|1|G|1245
*
6WRS|1|1|C|1277
6WRS|1|1|G|1278
6WRS|1|1|C|1279

Current chains

Chain 1

23S rRNA

Nearby chains

Chain S

50S ribosomal protein L4

Chain X

50S ribosomal protein L15