IL_6WRS_046

3D structure

PDB id

6WRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UAAU*GAAAA

Length

9 nucleotides

Bulged bases

6WRS|1|1|A|1633

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6WRS_046 not in the Motif Atlas

Geometric match to IL_4LFB_060

Geometric discrepancy: 0.2961

The information below is about IL_4LFB_060

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_58355.2

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

43

Unit IDs

6WRS|1|1|U|1448
6WRS|1|1|A|1449
6WRS|1|1|A|1450
6WRS|1|1|U|1451
*
6WRS|1|1|G|1631
6WRS|1|1|A|1632
6WRS|1|1|A|1633
6WRS|1|1|A|1634
6WRS|1|1|A|1635

Current chains

Chain 1

23S rRNA

Nearby chains