IL_6WRS_051

3D structure

PDB id

6WRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUAAGC*GUGAUGG

Length

13 nucleotides

Bulged bases

6WRS|1|1|G|1569

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6WRS_051 not in the Motif Atlas

Geometric match to IL_4WF9_058

Geometric discrepancy: 0.1793

The information below is about IL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_88190.1

Basepair signature

cWW-L-R-tHS-L-R-L-R-cWW

Number of instances in this motif group

1

Unit IDs

6WRS|1|1|C|1511
6WRS|1|1|U|1512
6WRS|1|1|A|1513
6WRS|1|1|A|1514
6WRS|1|1|G|1515
6WRS|1|1|C|1516
*
6WRS|1|1|G|1564
6WRS|1|1|U|1565
6WRS|1|1|G|1566
6WRS|1|1|A|1567
6WRS|1|1|U|1568
6WRS|1|1|G|1569
6WRS|1|1|G|1570

Current chains

Chain 1

23S rRNA

Nearby chains