3D structure

PDB id
6WRS (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolid
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CGUAAC*GGAGAAG
Length
13 nucleotides
Bulged bases
6WRS|1|1|G|1743
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6WRS_057 not in the Motif Atlas
Geometric match to IL_5TBW_078
Geometric discrepancy: 0.1119
The information below is about IL_5TBW_078
Detailed Annotation
tSH-tSH-tHH-tHS
Broad Annotation
No text annotation
Motif group
IL_65969.4
Basepair signature
cWW-tSH-L-R-tHH-tHS-cWW
Number of instances in this motif group
7

Unit IDs

6WRS|1|1|C|1730
6WRS|1|1|G|1731
6WRS|1|1|U|1732
6WRS|1|1|A|1733
6WRS|1|1|A|1734
6WRS|1|1|C|1735
*
6WRS|1|1|G|1740
6WRS|1|1|G|1741
6WRS|1|1|A|1742
6WRS|1|1|G|1743
6WRS|1|1|A|1744
6WRS|1|1|A|1745
6WRS|1|1|G|1746

Current chains

Chain 1
23S rRNA

Nearby chains

Chain B
50S ribosomal protein L2

Coloring options:


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