IL_6WRS_070

3D structure

PDB id

6WRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

ACGG*CCUAU

Length

9 nucleotides

Bulged bases

6WRS|1|1|C|2082, 6WRS|1|1|U|2640, 6WRS|1|1|A|2641

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6WRS_070 not in the Motif Atlas

Homologous match to IL_7A0S_074

Geometric discrepancy: 0.2207

The information below is about IL_7A0S_074

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70335.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

6WRS|1|1|A|2081
6WRS|1|1|C|2082
6WRS|1|1|G|2083
6WRS|1|1|G|2084
*
6WRS|1|1|C|2638
6WRS|1|1|C|2639
6WRS|1|1|U|2640
6WRS|1|1|A|2641
6WRS|1|1|U|2642

Current chains

Chain 1

23S rRNA

Nearby chains

Chain E

uL22

Chain L

50S ribosomal protein L3

Chain N

50S ribosomal protein L32