IL_6WRU_065

3D structure

PDB id

6WRU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUAAG*CGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6WRU_065 not in the Motif Atlas

Homologous match to IL_4WF9_073

Geometric discrepancy: 0.1296

The information below is about IL_4WF9_073

Detailed Annotation

UAA/GAN with extra stack

Broad Annotation

No text annotation

Motif group

IL_89021.3

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

7

Unit IDs

6WRU|1|1|U|1878
6WRU|1|1|U|1879
6WRU|1|1|A|1880
6WRU|1|1|A|1881
6WRU|1|1|G|1882
*
6WRU|1|1|C|1914
6WRU|1|1|G|1915
6WRU|1|1|A|1916
6WRU|1|1|A|1917
6WRU|1|1|G|1918

Current chains

Chain 1

23S rRNA

Nearby chains