IL_6WYV_043

3D structure

PDB id

6WYV (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compounds 47 and VS1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CAAG*CCCAAACCGACAC(6MZ)GGUG

Length

22 nucleotides

Bulged bases

6WYV|1|I|C|1607, 6WYV|1|I|A|1614

QA status

Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WYV|1|I|C|1306
6WYV|1|I|A|1307
6WYV|1|I|A|1308
6WYV|1|I|G|1309
*
6WYV|1|I|C|1605
6WYV|1|I|C|1606
6WYV|1|I|C|1607
6WYV|1|I|A|1608
6WYV|1|I|A|1609
6WYV|1|I|A|1610
6WYV|1|I|C|1611
6WYV|1|I|C|1612
6WYV|1|I|G|1613
6WYV|1|I|A|1614
6WYV|1|I|C|1615
6WYV|1|I|A|1616
6WYV|1|I|C|1617
6WYV|1|I|6MZ|1618
6WYV|1|I|G|1619
6WYV|1|I|G|1620
6WYV|1|I|U|1621
6WYV|1|I|G|1622

Current chains

Chain I

23S ribosomal RNA

Nearby chains