IL_6WYV_066
3D structure
- PDB id
- 6WYV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 50S ribosome bound to compounds 47 and VS1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- UGCAAAC*GGACGUAUA
- Length
- 16 nucleotides
- Bulged bases
- 6WYV|1|I|A|1801, 6WYV|1|I|C|1816, 6WYV|1|I|U|1820
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WYV_066 not in the Motif Atlas
- Homologous match to IL_7RQB_070
- Geometric discrepancy: 0.0801
- The information below is about IL_7RQB_070
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_17069.3
- Basepair signature
- cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW
- Number of instances in this motif group
- 5
Unit IDs
6WYV|1|I|U|1798
6WYV|1|I|G|1799
6WYV|1|I|C|1800
6WYV|1|I|A|1801
6WYV|1|I|A|1802
6WYV|1|I|A|1803
6WYV|1|I|C|1804
*
6WYV|1|I|G|1813
6WYV|1|I|G|1814
6WYV|1|I|A|1815
6WYV|1|I|C|1816
6WYV|1|I|G|1817
6WYV|1|I|U|1818
6WYV|1|I|A|1819
6WYV|1|I|U|1820
6WYV|1|I|A|1821
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain K
- 50S ribosomal protein L2
Coloring options: