IL_6X43_001
3D structure
- PDB id
- 6X43 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mfd-bound E.coli RNA polymerase elongation complex - II state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GTATTC*GAATAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6X43|1|P|DG|3
6X43|1|P|DT|4
6X43|1|P|DA|5
6X43|1|P|DT|6
6X43|1|P|DT|7
6X43|1|P|DC|8
*
6X43|1|Q|DG|57
6X43|1|Q|DA|58
6X43|1|Q|DA|59
6X43|1|Q|DT|60
6X43|1|Q|DA|61
6X43|1|Q|DC|62
Current chains
- Chain P
- DNA (64-MER)
- Chain Q
- DNA (64-MER)
Nearby chains
- Chain I
- DNA-directed RNA polymerase subunit beta
- Chain J
- DNA-directed RNA polymerase subunit beta'
Coloring options: