IL_6X6T_058
3D structure
- PDB id
- 6X6T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGGAUU*AUGAAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6X6T_058 not in the Motif Atlas
- Homologous match to IL_5J7L_057
- Geometric discrepancy: 0.0794
- The information below is about IL_5J7L_057
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85536.2
- Basepair signature
- cWW-tSH-L-R-tHS-cWW-cWW
- Number of instances in this motif group
- 8
Unit IDs
6X6T|1|D|C|1303
6X6T|1|D|G|1304
6X6T|1|D|G|1305
6X6T|1|D|A|1306
6X6T|1|D|U|1307
6X6T|1|D|U|1308
*
6X6T|1|D|A|1329
6X6T|1|D|U|1330
6X6T|1|D|G|1331
6X6T|1|D|A|1332
6X6T|1|D|A|1333
6X6T|1|D|G|1334
Current chains
- Chain D
- 16S rRNA
Nearby chains
- Chain X
- 30S ribosomal protein S13
Coloring options: