IL_6X6T_156

3D structure

PDB id

6X6T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGGGAG*CGACCUUGAAAUACCA

Length

22 nucleotides

Bulged bases

6X6T|1|a|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6X6T|1|a|U|2122
6X6T|1|a|G|2123
6X6T|1|a|G|2124
6X6T|1|a|G|2125
6X6T|1|a|A|2126
6X6T|1|a|G|2127
*
6X6T|1|a|C|2161
6X6T|1|a|G|2162
6X6T|1|a|A|2163
6X6T|1|a|C|2164
6X6T|1|a|C|2165
6X6T|1|a|U|2166
6X6T|1|a|U|2167
6X6T|1|a|G|2168
6X6T|1|a|A|2169
6X6T|1|a|A|2170
6X6T|1|a|A|2171
6X6T|1|a|U|2172
6X6T|1|a|A|2173
6X6T|1|a|C|2174
6X6T|1|a|C|2175
6X6T|1|a|A|2176

Current chains

Chain a

23S rRNA

Nearby chains

Chain A

Transfer RNA; tRNA