IL_6XHW_076
3D structure
- PDB id
- 6XHW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.5 Å
Loop
- Sequence
- ACGA*UCUAU
- Length
- 9 nucleotides
- Bulged bases
- 6XHW|1|1A|C|2055, 6XHW|1|1A|C|2612, 6XHW|1|1A|U|2613
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XHW_076 not in the Motif Atlas
- Homologous match to IL_9DFE_079
- Geometric discrepancy: 0.0693
- The information below is about IL_9DFE_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_70335.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6XHW|1|1A|A|2054
6XHW|1|1A|C|2055
6XHW|1|1A|G|2056
6XHW|1|1A|A|2057
*
6XHW|1|1A|U|2611
6XHW|1|1A|C|2612
6XHW|1|1A|U|2613
6XHW|1|1A|A|2614
6XHW|1|1A|U|2615
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 15
- 50S ribosomal protein L32
- Chain 1E
- 50S ribosomal protein L3
- Chain 1W
- 50S ribosomal protein L22
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