IL_6XHW_098
3D structure
- PDB id
- 6XHW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.5 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 6XHW|1|1A|A|2602
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XHW_098 not in the Motif Atlas
- Homologous match to IL_7RQB_101
- Geometric discrepancy: 0.0482
- The information below is about IL_7RQB_101
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_37497.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 118
Unit IDs
6XHW|1|1A|C|2591
6XHW|1|1A|G|2592
*
6XHW|1|1A|C|2601
6XHW|1|1A|A|2602
6XHW|1|1A|G|2603
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 10
- 50S ribosomal protein L27
- Chain 1D
- 50S ribosomal protein L2
- Chain 1a
- Small subunit ribosomal RNA; SSU rRNA
- Chain 1w
- Transfer RNA; tRNA
- Chain 1x
- Transfer RNA; tRNA
Coloring options: