IL_6XHW_363

3D structure

PDB id

6XHW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

GGAGCCUGUGAAC*GGGAGGCGCCGGUGAAAUAC

Length

33 nucleotides

Bulged bases

6XHW|1|2A|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XHW|1|2A|G|2124
6XHW|1|2A|G|2125
6XHW|1|2A|A|2126
6XHW|1|2A|G|2127
6XHW|1|2A|C|2128
6XHW|1|2A|C|2129
6XHW|1|2A|U|2130
6XHW|1|2A|G|2131
6XHW|1|2A|U|2132
6XHW|1|2A|G|2133
6XHW|1|2A|A|2134
6XHW|1|2A|A|2135
6XHW|1|2A|C|2136
*
6XHW|1|2A|G|2155
6XHW|1|2A|G|2156
6XHW|1|2A|G|2157
6XHW|1|2A|A|2158
6XHW|1|2A|G|2159
6XHW|1|2A|G|2160
6XHW|1|2A|C|2161
6XHW|1|2A|G|2162
6XHW|1|2A|C|2163
6XHW|1|2A|C|2164
6XHW|1|2A|G|2165
6XHW|1|2A|G|2166
6XHW|1|2A|U|2167
6XHW|1|2A|G|2168
6XHW|1|2A|A|2169
6XHW|1|2A|A|2170
6XHW|1|2A|A|2171
6XHW|1|2A|U|2172
6XHW|1|2A|A|2173
6XHW|1|2A|C|2174

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2y

Transfer RNA; tRNA