IL_6XHX_140

3D structure

PDB id

6XHX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with erythromycin and protein Y (YfiA) at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

UGAAAGACC*GGGGGAG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XHX|1|1a|U|605
6XHX|1|1a|G|606
6XHX|1|1a|A|607
6XHX|1|1a|A|608
6XHX|1|1a|A|609
6XHX|1|1a|G|610
6XHX|1|1a|A|611
6XHX|1|1a|C|612
6XHX|1|1a|C|613
*
6XHX|1|1a|G|627
6XHX|1|1a|G|628
6XHX|1|1a|G|629
6XHX|1|1a|G|630
6XHX|1|1a|G|631
6XHX|1|1a|A|632
6XHX|1|1a|G|633

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains

Chain 1d

30S ribosomal protein S4

Chain 1h

30S ribosomal protein S8

Chain 1p

30S ribosomal protein S16

Chain 1q

30S ribosomal protein S17