IL_6XHX_214

3D structure

PDB id

6XHX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with erythromycin and protein Y (YfiA) at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CGAAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

6XHX|1|2A|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XHX|1|2A|C|1043
6XHX|1|2A|G|1044
6XHX|1|2A|A|1045
6XHX|1|2A|A|1046
6XHX|1|2A|G|1047
6XHX|1|2A|A|1048
6XHX|1|2A|C|1049
6XHX|1|2A|A|1050
6XHX|1|2A|G|1051
6XHX|1|2A|C|1052
*
6XHX|1|2A|G|1107
6XHX|1|2A|U|1108
6XHX|1|2A|C|1109
6XHX|1|2A|G|1110
6XHX|1|2A|A|1111
6XHX|1|2A|G|1112

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2H

50S ribosomal protein L6