IL_6XHX_216

3D structure

PDB id

6XHX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with erythromycin and protein Y (YfiA) at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

GGUGG*CCAUCC

Length

11 nucleotides

Bulged bases

6XHX|1|2A|C|1076, 6XHX|1|2A|A|1077, 6XHX|1|2A|U|1078

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XHX|1|2A|G|1058
6XHX|1|2A|G|1059
6XHX|1|2A|U|1060
6XHX|1|2A|G|1062
6XHX|1|2A|G|1063
*
6XHX|1|2A|C|1075
6XHX|1|2A|C|1076
6XHX|1|2A|A|1077
6XHX|1|2A|U|1078
6XHX|1|2A|C|1079
6XHX|1|2A|C|1080

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2Q

50S ribosomal protein L16

Chain 2Z

50S ribosomal protein L25