IL_6XQD_009

3D structure

PDB id

6XQD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGGACC*GGUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XQD|1|1A|C|272|||J
6XQD|1|1A|G|274
6XQD|1|1A|G|275
6XQD|1|1A|A|278
6XQD|1|1A|C|279
6XQD|1|1A|C|280
*
6XQD|1|1A|G|360
6XQD|1|1A|G|361
6XQD|1|1A|U|362
6XQD|1|1A|G|363

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains