IL_6XQD_255

3D structure

PDB id

6XQD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUGUGAACCC*GGGGGAG

Length

17 nucleotides

Bulged bases

6XQD|1|2A|U|2132

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XQD|1|2A|C|2129
6XQD|1|2A|U|2130
6XQD|1|2A|G|2131
6XQD|1|2A|U|2132
6XQD|1|2A|G|2133
6XQD|1|2A|A|2134
6XQD|1|2A|A|2135
6XQD|1|2A|C|2136
6XQD|1|2A|C|2137
6XQD|1|2A|C|2138
*
6XQD|1|2A|G|2153
6XQD|1|2A|G|2154
6XQD|1|2A|G|2155
6XQD|1|2A|G|2156
6XQD|1|2A|G|2157
6XQD|1|2A|A|2158
6XQD|1|2A|G|2159

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains