IL_6XQE_039

3D structure

PDB id

6XQE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGCGAAGACAG*UCGAGUG

Length

18 nucleotides

Bulged bases

6XQE|1|1A|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XQE|1|1A|C|1041
6XQE|1|1A|G|1042
6XQE|1|1A|C|1043
6XQE|1|1A|G|1044
6XQE|1|1A|A|1045
6XQE|1|1A|A|1046
6XQE|1|1A|G|1047
6XQE|1|1A|A|1048
6XQE|1|1A|C|1049
6XQE|1|1A|A|1050
6XQE|1|1A|G|1051
*
6XQE|1|1A|U|1108
6XQE|1|1A|C|1109
6XQE|1|1A|G|1110
6XQE|1|1A|A|1111
6XQE|1|1A|G|1112
6XQE|1|1A|U|1113
6XQE|1|1A|G|1114

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1H

50S ribosomal protein L6

Chain 1Z

50S ribosomal protein L25