IL_6XQE_354
3D structure
- PDB id
- 6XQE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GGU*ACCC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XQE_354 not in the Motif Atlas
- Geometric match to IL_7SZU_003
- Geometric discrepancy: 0.3373
- The information below is about IL_7SZU_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_55516.2
- Basepair signature
- cWW-cWW-cSH-cWW
- Number of instances in this motif group
- 7
Unit IDs
6XQE|1|1a|G|657
6XQE|1|1a|G|658
6XQE|1|1a|U|659
*
6XQE|1|1a|A|746
6XQE|1|1a|C|747
6XQE|1|1a|C|748
6XQE|1|1a|C|749
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1o
- 30S ribosomal protein S15
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