IL_6XQE_386

3D structure

PDB id

6XQE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGAGC*GCGCCGGUGAAAUAC

Length

20 nucleotides

Bulged bases

6XQE|1|2A|C|2164

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XQE|1|2A|G|2124
6XQE|1|2A|G|2125
6XQE|1|2A|A|2126
6XQE|1|2A|G|2127
6XQE|1|2A|C|2128
*
6XQE|1|2A|G|2160
6XQE|1|2A|C|2161
6XQE|1|2A|G|2162
6XQE|1|2A|C|2163
6XQE|1|2A|C|2164
6XQE|1|2A|G|2165
6XQE|1|2A|G|2166
6XQE|1|2A|U|2167
6XQE|1|2A|G|2168
6XQE|1|2A|A|2169
6XQE|1|2A|A|2170
6XQE|1|2A|A|2171
6XQE|1|2A|U|2172
6XQE|1|2A|A|2173
6XQE|1|2A|C|2174

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains