IL_6XYW_007
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- CGAACUG*CUAAGUAG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XYW_007 not in the Motif Atlas
- Homologous match to IL_5J7L_250
- Geometric discrepancy: 0.1542
- The information below is about IL_5J7L_250
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
6XYW|1|1|C|173
6XYW|1|1|G|174
6XYW|1|1|A|175
6XYW|1|1|A|176
6XYW|1|1|C|177
6XYW|1|1|U|178
6XYW|1|1|G|179
*
6XYW|1|1|C|186
6XYW|1|1|U|187
6XYW|1|1|A|188
6XYW|1|1|A|189
6XYW|1|1|G|190
6XYW|1|1|U|191
6XYW|1|1|A|192
6XYW|1|1|G|193
Current chains
- Chain 1
- RNA (2842-MER)
Nearby chains
- Chain AD
- Ribosomal protein L35
- Chain Ax
- AT4g31460/F3L17_30
Coloring options: