IL_6XYW_034
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- GCUAG*CAACC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XYW_034 not in the Motif Atlas
- Homologous match to IL_5J7L_274
- Geometric discrepancy: 0.3065
- The information below is about IL_5J7L_274
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
6XYW|1|1|G|1019
6XYW|1|1|C|1020
6XYW|1|1|U|1021
6XYW|1|1|A|1022
6XYW|1|1|G|1023
*
6XYW|1|1|C|1045
6XYW|1|1|A|1046
6XYW|1|1|A|1047
6XYW|1|1|C|1048
6XYW|1|1|C|1049
Current chains
- Chain 1
- RNA (2842-MER)
Nearby chains
- Chain Av
- Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein
Coloring options: