3D structure

PDB id
6XYW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the plant mitochondrial ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.86 Å

Loop

Sequence
CGAUGACAAC*GUCUAG
Length
16 nucleotides
Bulged bases
6XYW|1|1|U|1195
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6XYW|1|1|C|1192
6XYW|1|1|G|1193
6XYW|1|1|A|1194
6XYW|1|1|U|1195
6XYW|1|1|G|1196
6XYW|1|1|A|1197
6XYW|1|1|C|1198
6XYW|1|1|A|1199
6XYW|1|1|A|1200
6XYW|1|1|C|1201
*
6XYW|1|1|G|1256
6XYW|1|1|U|1257
6XYW|1|1|C|1258
6XYW|1|1|U|1259
6XYW|1|1|A|1260
6XYW|1|1|G|1261

Current chains

Chain 1
RNA (2842-MER)

Nearby chains

Chain AJ
39S ribosomal protein
Chain Ah
50S ribosomal protein L10

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1421 s