IL_6XYW_050
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- CGU*AGUG
- Length
- 7 nucleotides
- Bulged bases
- 6XYW|1|1|G|1404
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XYW_050 not in the Motif Atlas
- Homologous match to IL_4WF9_044
- Geometric discrepancy: 0.1302
- The information below is about IL_4WF9_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_42997.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 23
Unit IDs
6XYW|1|1|C|1352
6XYW|1|1|G|1353
6XYW|1|1|U|1354
*
6XYW|1|1|A|1403
6XYW|1|1|G|1404
6XYW|1|1|U|1405
6XYW|1|1|G|1406
Current chains
- Chain 1
- RNA (2842-MER)
Nearby chains
- Chain AH
- Mitochondrial ribosomal protein L51/S25/CI-B8 family protein
- Chain Ad
- 50S ribosomal protein L4
- Chain Al
- Ribosomal protein L18e/L15 superfamily protein
- Chain Aq
- 50S ribosomal protein L20
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