IL_6XYW_051

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

GUCAAUC*GAUAUC

Length

13 nucleotides

Bulged bases

6XYW|1|1|A|1361

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|1|G|1358
6XYW|1|1|U|1359
6XYW|1|1|C|1360
6XYW|1|1|A|1361
6XYW|1|1|A|1362
6XYW|1|1|U|1363
6XYW|1|1|C|1364
*
6XYW|1|1|G|1394
6XYW|1|1|A|1395
6XYW|1|1|U|1396
6XYW|1|1|A|1397
6XYW|1|1|U|1398
6XYW|1|1|C|1399

Current chains

Chain 1

RNA (2842-MER)

Nearby chains

Chain AH

Mitochondrial ribosomal protein L51/S25/CI-B8 family protein

Chain Ad

50S ribosomal protein L4

Chain Al

Ribosomal protein L18e/L15 superfamily protein