IL_6XYW_081
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- CGAAAUUCCUUG*CCUG
- Length
- 16 nucleotides
- Bulged bases
- 6XYW|1|1|A|2249, 6XYW|1|1|U|2255
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XYW_081 not in the Motif Atlas
- Homologous match to IL_7A0S_072
- Geometric discrepancy: 0.2848
- The information below is about IL_7A0S_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04332.3
- Basepair signature
- cWW-L-R-L-cWW-L-L-R-L-R-L
- Number of instances in this motif group
- 2
Unit IDs
6XYW|1|1|C|2245
6XYW|1|1|G|2246
6XYW|1|1|A|2247
6XYW|1|1|A|2248
6XYW|1|1|A|2249
6XYW|1|1|U|2250
6XYW|1|1|U|2251
6XYW|1|1|C|2252
6XYW|1|1|C|2253
6XYW|1|1|U|2254
6XYW|1|1|U|2255
6XYW|1|1|G|2256
*
6XYW|1|1|C|2272
6XYW|1|1|C|2273
6XYW|1|1|U|2274
6XYW|1|1|G|2275
Current chains
- Chain 1
- RNA (2842-MER)
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain BB
- mS38
Coloring options: