IL_6XYW_084
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- GUGCA*UACGCC
- Length
- 11 nucleotides
- Bulged bases
- 6XYW|1|1|U|2379, 6XYW|1|1|A|2737
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XYW_084 not in the Motif Atlas
- Geometric match to IL_4V88_429
- Geometric discrepancy: 0.3153
- The information below is about IL_4V88_429
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_30621.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 66
Unit IDs
6XYW|1|1|G|2378
6XYW|1|1|U|2379
6XYW|1|1|G|2380
6XYW|1|1|C|2381
6XYW|1|1|A|2382
*
6XYW|1|1|U|2736
6XYW|1|1|A|2737
6XYW|1|1|C|2738
6XYW|1|1|G|2739
6XYW|1|1|C|2740
6XYW|1|1|C|2741
Current chains
- Chain 1
- RNA (2842-MER)
Nearby chains
- Chain Ab
- Expressed protein
- Chain Ad
- 50S ribosomal protein L4
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