IL_6XYW_088

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

UGAUCG*CGUCUA

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|1|U|2412
6XYW|1|1|G|2413
6XYW|1|1|A|2414
6XYW|1|1|U|2415
6XYW|1|1|C|2416
6XYW|1|1|G|2417
*
6XYW|1|1|C|2479
6XYW|1|1|G|2480
6XYW|1|1|U|2481
6XYW|1|1|C|2482
6XYW|1|1|U|2483
6XYW|1|1|A|2484

Current chains

Chain 1

RNA (2842-MER)

Nearby chains

Chain Ag

Ribosomal protein L9/RNase H1