IL_6XYW_158

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

UGUUG*CACUCA

Length

11 nucleotides

Bulged bases

6XYW|1|2|U|1118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|2|U|1115
6XYW|1|2|G|1116
6XYW|1|2|U|1117
6XYW|1|2|U|1118
6XYW|1|2|G|1119
*
6XYW|1|2|C|1495
6XYW|1|2|A|1496
6XYW|1|2|C|1497
6XYW|1|2|U|1498
6XYW|1|2|C|1499
6XYW|1|2|A|1500

Current chains

Chain 2

RNA (1743-MER)

Nearby chains

Chain Bh

30S ribosomal protein S9, mitochondrial

Chain Bi

40S ribosomal protein S10, mitochondrial

Chain Bz

AT3G18240 protein