3D structure

PDB id
6XYW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the plant mitochondrial ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.86 Å

Loop

Sequence
UACAAUGGG*CCGGAAAG
Length
17 nucleotides
Bulged bases
6XYW|1|2|G|1635
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6XYW|1|2|U|1597
6XYW|1|2|A|1598
6XYW|1|2|C|1599
6XYW|1|2|A|1600
6XYW|1|2|A|1601
6XYW|1|2|U|1602
6XYW|1|2|G|1603
6XYW|1|2|G|1604
6XYW|1|2|G|1605
*
6XYW|1|2|C|1632
6XYW|1|2|C|1633
6XYW|1|2|G|1634
6XYW|1|2|G|1635
6XYW|1|2|A|1636
6XYW|1|2|A|1637
6XYW|1|2|A|1638
6XYW|1|2|G|1639

Current chains

Chain 2
RNA (1743-MER)

Nearby chains

Chain Bf
Ribosomal protein S7, mitochondrial
Chain Bh
30S ribosomal protein S9, mitochondrial
Chain Bi
40S ribosomal protein S10, mitochondrial
Chain Bm
At2g34520
Chain Bt
30S ribosomal protein S31, mitochondrial
Chain Bw
Mitochondrial 28S ribosomal protein S29-like protein
Chain Bz
AT3G18240 protein

Coloring options:

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