IL_6XYW_171

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

CGGAUUG*CAUGAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|2|C|1652
6XYW|1|2|G|1653
6XYW|1|2|G|1654
6XYW|1|2|A|1655
6XYW|1|2|U|1656
6XYW|1|2|U|1657
6XYW|1|2|G|1658
*
6XYW|1|2|C|1677
6XYW|1|2|A|1678
6XYW|1|2|U|1679
6XYW|1|2|G|1680
6XYW|1|2|A|1681
6XYW|1|2|A|1682
6XYW|1|2|G|1683

Current chains

Chain 2

RNA (1743-MER)

Nearby chains

Chain Bl

Small ribosomal subunit protein S13, mitochondrial

Chain Bt

30S ribosomal protein S31, mitochondrial

Chain Bw

Mitochondrial 28S ribosomal protein S29-like protein