IL_6XYW_176

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

GGAAUUG*CUUCGAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|2|G|1765
6XYW|1|2|G|1766
6XYW|1|2|A|1767
6XYW|1|2|A|1768
6XYW|1|2|U|1769
6XYW|1|2|U|1770
6XYW|1|2|G|1771
*
6XYW|1|2|C|1874
6XYW|1|2|U|1875
6XYW|1|2|U|1876
6XYW|1|2|C|1877
6XYW|1|2|G|1878
6XYW|1|2|A|1879
6XYW|1|2|C|1880

Current chains

Chain 2

RNA (1743-MER)

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain Ak

50S ribosomal protein HLP, mitochondrial