IL_6XYW_177

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

GAAC*GGCGC

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|2|G|1790
6XYW|1|2|A|1791
6XYW|1|2|A|1792
6XYW|1|2|C|1793
*
6XYW|1|2|G|1854
6XYW|1|2|G|1855
6XYW|1|2|C|1856
6XYW|1|2|G|1857
6XYW|1|2|C|1858

Current chains

Chain 2

RNA (1743-MER)

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain AM

At1g73940/F2P9_19

Chain Ap

At1g24240/F3I6_17