IL_6XYW_180

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

GACUUCU*AAGGCU

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|2|G|1807
6XYW|1|2|A|1808
6XYW|1|2|C|1809
6XYW|1|2|U|1810
6XYW|1|2|U|1811
6XYW|1|2|C|1812
6XYW|1|2|U|1813
*
6XYW|1|2|A|1833
6XYW|1|2|A|1834
6XYW|1|2|G|1835
6XYW|1|2|G|1836
6XYW|1|2|C|1837
6XYW|1|2|U|1838

Current chains

Chain 2

RNA (1743-MER)

Nearby chains

Chain BI

rPPR*

Chain By

28S ribosomal S34 protein