IL_6XYW_183

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

ACGUGAAAAC*GGAAUCGUCU

Length

20 nucleotides

Bulged bases

6XYW|1|3|A|26

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|3|A|21
6XYW|1|3|C|22
6XYW|1|3|G|23
6XYW|1|3|U|24
6XYW|1|3|G|25
6XYW|1|3|A|26
6XYW|1|3|A|27
6XYW|1|3|A|28
6XYW|1|3|A|29
6XYW|1|3|C|30
*
6XYW|1|3|G|59
6XYW|1|3|G|60
6XYW|1|3|A|61
6XYW|1|3|A|62
6XYW|1|3|U|63
6XYW|1|3|C|64
6XYW|1|3|G|65
6XYW|1|3|U|66
6XYW|1|3|C|67
6XYW|1|3|U|68

Current chains

Chain 3

RNA (118-MER)

Nearby chains

Chain AF

At4g05400

Chain Ae

60S ribosomal protein L5, mitochondrial

Chain Ao

At5g27820