IL_6XYW_188

3D structure

PDB id

6XYW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the plant mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

AGCUCC*GCUCUUU

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XYW|1|1|A|130
6XYW|1|1|G|131
6XYW|1|1|C|132
6XYW|1|1|U|133
6XYW|1|1|C|134
6XYW|1|1|C|135
*
6XYW|1|1|G|149
6XYW|1|1|C|150
6XYW|1|1|U|151
6XYW|1|1|C|152
6XYW|1|1|U|153
6XYW|1|1|U|154
6XYW|1|1|U|155

Current chains

Chain 1

RNA (2842-MER)

Nearby chains

Chain AQ

Pentatricopeptide repeat-containing protein PNM1, mitochondrial

Chain At

At4g39880

Chain Ay

At1g07830/F24B9_7