IL_6XYW_198
3D structure
- PDB id
- 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the plant mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- GCAAU*AUUC
- Length
- 9 nucleotides
- Bulged bases
- 6XYW|1|1|C|1161
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XYW_198 not in the Motif Atlas
- Geometric match to IL_4EYA_008
- Geometric discrepancy: 0.272
- The information below is about IL_4EYA_008
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_65740.1
- Basepair signature
- cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
6XYW|1|1|G|1160
6XYW|1|1|C|1161
6XYW|1|1|A|1162
6XYW|1|1|A|1163
6XYW|1|1|U|1164
*
6XYW|1|1|A|1297
6XYW|1|1|U|1298
6XYW|1|1|U|1299
6XYW|1|1|C|1300
Current chains
- Chain 1
- RNA (2842-MER)
Nearby chains
- Chain 3
- RNA (118-MER)
- Chain AL
- Uncharacterized protein At1g27435/F17L21.30
- Chain Aj
- At1g01640
- Chain Aq
- 50S ribosomal protein L20
Coloring options: