Loop IL_6XYW

3D structure

PDB id: 6XYW (explore in PDB, NAKB, or RNA 3D Hub)
Description: Structure of the plant mitochondrial ribosome
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.86 Å

Loop

Sequence: UUGACUACAAAACC*GCGCCUCUUCCCCUCACUCUCCUUUCUCCAAUA
Length: 47 nucleotides
Bulged bases: 6XYW|1|1|C|1570, 6XYW|1|1|U|1571, 6XYW|1|1|C|1631, 6XYW|1|1|U|1635, 6XYW|1|1|C|1640, 6XYW|1|1|A|1643, 6XYW|1|1|C|1644, 6XYW|1|1|U|1645, 6XYW|1|1|C|1646, 6XYW|1|1|U|1647, 6XYW|1|1|C|1648, 6XYW|1|1|C|1649, 6XYW|1|1|C|1656
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6XYW|1|1|U|1566
6XYW|1|1|U|1567
6XYW|1|1|G|1568
6XYW|1|1|A|1569
6XYW|1|1|C|1570
6XYW|1|1|U|1571
6XYW|1|1|A|1572
6XYW|1|1|C|1573
6XYW|1|1|A|1574
6XYW|1|1|A|1575
6XYW|1|1|A|1576
6XYW|1|1|A|1577
6XYW|1|1|C|1578
6XYW|1|1|C|1579
*
6XYW|1|1|G|1628
6XYW|1|1|C|1629
6XYW|1|1|G|1630
6XYW|1|1|C|1631
6XYW|1|1|C|1632
6XYW|1|1|U|1633
6XYW|1|1|C|1634
6XYW|1|1|U|1635
6XYW|1|1|U|1636
6XYW|1|1|C|1637
6XYW|1|1|C|1638
6XYW|1|1|C|1639
6XYW|1|1|C|1640
6XYW|1|1|U|1641
6XYW|1|1|C|1642
6XYW|1|1|A|1643
6XYW|1|1|C|1644
6XYW|1|1|U|1645
6XYW|1|1|C|1646
6XYW|1|1|U|1647
6XYW|1|1|C|1648
6XYW|1|1|C|1649
6XYW|1|1|U|1650
6XYW|1|1|U|1651
6XYW|1|1|U|1652
6XYW|1|1|C|1653
6XYW|1|1|U|1654
6XYW|1|1|C|1655
6XYW|1|1|C|1656
6XYW|1|1|A|1657
6XYW|1|1|A|1658
6XYW|1|1|U|1659
6XYW|1|1|A|1660

Current chains

Chain 1: RNA (2842-MER)

Nearby chains

Chain AM: At1g73940/F2P9_19
Chain AN: At3g51010
Chain AO: Pentatricopeptide repeat-containing protein At1g60770

IL_6XYW_203