3D structure

PDB id
6XYW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the plant mitochondrial ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.86 Å

Loop

Sequence
UGCGAAGGUAGGCUC*GAGCG
Length
20 nucleotides
Bulged bases
6XYW|1|1|A|2590
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6XYW|1|1|U|2585
6XYW|1|1|G|2586
6XYW|1|1|C|2587
6XYW|1|1|G|2588
6XYW|1|1|A|2589
6XYW|1|1|A|2590
6XYW|1|1|G|2591
6XYW|1|1|G|2592
6XYW|1|1|U|2593
6XYW|1|1|A|2594
6XYW|1|1|G|2595
6XYW|1|1|G|2596
6XYW|1|1|C|2597
6XYW|1|1|U|2598
6XYW|1|1|C|2599
*
6XYW|1|1|G|2619
6XYW|1|1|A|2620
6XYW|1|1|G|2621
6XYW|1|1|C|2622
6XYW|1|1|G|2623

Current chains

Chain 1
RNA (2842-MER)

Nearby chains

Chain 3
RNA (118-MER)
Chain AC
At3g06320
Chain AK
At4g22000
Chain Ao
At5g27820

Coloring options:

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