IL_6XZ7_018

3D structure

PDB id

6XZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

UU*GGA

Length

5 nucleotides

Bulged bases

6XZ7|1|A|G|729

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6XZ7_018 not in the Motif Atlas

Geometric match to IL_5J7L_262

Geometric discrepancy: 0.051

The information below is about IL_5J7L_262

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.14

Basepair signature

cWW-L-cWW

Number of instances in this motif group

50

Unit IDs

6XZ7|1|A|U|702
6XZ7|1|A|U|703
*
6XZ7|1|A|G|728
6XZ7|1|A|G|729
6XZ7|1|A|A|730

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2